BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012H05LP1|AL426430
(781 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1646 1542 0.0
>3x_Contig1646
Length = 14145
Score = 1542 bits (778), Expect = 0.0
Identities = 780/781 (99%)
Strand = Plus / Plus
Query: 1 atcatcatctatgaaactaagtntaatcttcataatcgaggtgtatttcataaaaaatta 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 10387 atcatcatctatgaaactaagtttaatcttcataatcgaggtgtatttcataaaaaatta 10446
Query: 61 ggggactagttcttggtttggggttgaatctgccagcctaccaggggtatgttccgcatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10447 ggggactagttcttggtttggggttgaatctgccagcctaccaggggtatgttccgcatt 10506
Query: 121 aatcgcggtccagcgagaagcaacattactcagctaagcaccgttctgtctctttcctta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10507 aatcgcggtccagcgagaagcaacattactcagctaagcaccgttctgtctctttcctta 10566
Query: 181 atcgaggtgacaatgcgttgatagttttatcaatggtttcccgattaggaatattttact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10567 atcgaggtgacaatgcgttgatagttttatcaatggtttcccgattaggaatattttact 10626
Query: 241 atctctatctgttatctcgaaaaggtttaatcgaggtttgcgttaaagatgattaaaaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10627 atctctatctgttatctcgaaaaggtttaatcgaggtttgcgttaaagatgattaaaaaa 10686
Query: 301 tgatagattcgagtcacctcgaatgaaaatatgcatagcattacttggttcgtgtcagaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10687 tgatagattcgagtcacctcgaatgaaaatatgcatagcattacttggttcgtgtcagaa 10746
Query: 361 gctttggtatcttgttgatacggtactgacaaatagggatggttacttgggtataaggac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10747 gctttggtatcttgttgatacggtactgacaaatagggatggttacttgggtataaggac 10806
Query: 421 gtaaccttgttagttgctgtcaagaatgattcttttaatcggtgtgcaacgcgatctttg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10807 gtaaccttgttagttgctgtcaagaatgattcttttaatcggtgtgcaacgcgatctttg 10866
Query: 481 tttataactgatccccgattttgttacactatgccaaacacgattataattcaccacatc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10867 tttataactgatccccgattttgttacactatgccaaacacgattataattcaccacatc 10926
Query: 541 aagatcaacgtattaacaaatacatggattagaagttgaatacttggtgatctccactat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10927 aagatcaacgtattaacaaatacatggattagaagttgaatacttggtgatctccactat 10986
Query: 601 tttgattaagaaaagaatattgaatctttcgataacggtgaacttttattgttaatcaca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10987 tttgattaagaaaagaatattgaatctttcgataacggtgaacttttattgttaatcaca 11046
Query: 661 tttgttgaaacagaaaaccaagggaacacgaacaataaacaaggttgttctaaatttgat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11047 tttgttgaaacagaaaaccaagggaacacgaacaataaacaaggttgttctaaatttgat 11106
Query: 721 aagattacagccattcgttttgattattctttactagtgttctttttttttggaatactt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11107 aagattacagccattcgttttgattattctttactagtgttctttttttttggaatactt 11166
Query: 781 a 781
|
Sbjct: 11167 a 11167
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7200
Number of Sequences: 1807
Number of extensions: 7200
Number of successful extensions: 36
Number of sequences better than 1.0e-20: 1
length of query: 781
length of database: 10,358,551
effective HSP length: 16
effective length of query: 765
effective length of database: 10,329,639
effective search space: 7902173835
effective search space used: 7902173835
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)